A selection of publications which presents and/ or utilizes the resources found on rbwb.org

• Kjonigsen LJ, Lillehaug S, Bjaalie JG, Witter MP, Leergaard TB. Waxholm Space atlas of the rat brain hippocampal region: three-dimensional delineations based on magnetic resonance and diffusion tensor imaging.
  Neuroimage. 2015 Mar;108:441-9. doi: 10.1016/j.neuroimage.2014.12.080. Epub 2015 Jan 10. PubMed PMID: 25585022
• Papp EA, Leergaard TB, Calabrese E, Johnson GA, Bjaalie JG. Waxholm Space atlas of the Sprague Dawley rat brain.
  Neuroimage. 2014 Apr 12;97C:374-386. doi: 10.1016/j.neuroimage.2014.04.001.
• Zakiewicz IM, Bjaalie JG, Leergaard TB.
  Brain-wide map of efferent projections from rat barrel cortex.
  Front Neuroinform. 2014 Feb 5;8:5. doi: 10.3389/fninf.2014.00005. eCollection 2014.
• Lillehaug S, Syverstad GH, Nilsson LN, Bjaalie JG, Leergaard TB, Torp R. Brainwide distribution and variance of amyloid-beta deposits in tg-ArcSwe mice. Neurobiol Aging. 2014 Mar;35(3):556-64. doi: 10.1016/j.neurobiolaging.2013.09.013.
• Stensrud MJ, Chaudhry FA, Leergaard TB, Bjaalie JG, Gundersen V. Vesicular glutamate transporter-3 in the rodent brain: vesicular colocalization with vesicular γ-aminobutyric acid transporter.
  J Comp Neurol. 2013 Sep 1;521(13):3042-56. doi: 10.1002/cne.23331.
• Zakiewicz IM, van Dongen YC, Leergaard TB, Bjaalie JG. Workflow and atlas system for brain-wide mapping of axonal connectivity in rat.
  PLoS One. 2011;6(8):e22669. doi: 10.1371/journal.pone.0022669.
• Kjonigsen LJ, Leergaard TB, Witter MP, Bjaalie JG.
  Digital atlas of anatomical subdivisions and boundaries of the rat hippocampal region.
  Front Neuroinform. 2011 Apr 8;5:2. doi: 10.3389/fninf.2011.00002. eCollection 2011.
• Odeh F, Leergaard TB, Boy J, Schmidt T, Riess O, Bjaalie JG.
  Atlas of transgenic Tet-Off Ca2+/calmodulin-dependent protein kinase II and prion protein promoter activity in the mouse brain.
  Neuroimage. 2011 Feb 14;54(4):2603-11. doi: 0.1016/j.neuroimage.2010.11.032.
• Holmseth S, Scott HA, Real K, Lehre KP, Leergaard TB, Bjaalie JG, Danbolt NC
  .The concentrations and distributions of three C-terminal variants of the GLT1 (EAAT2; slc1a2) glutamate transporter protein in rat brain tissue suggest differential regulation. Neuroscience. 2009
• Leergaard TB, Bjaalie JG.
  Topography of the complete corticopontine projection: from experiments to principal Maps.
  Front Neurosci. 2007 Oct 15;1(1):211-23. doi: 10.3389/neuro.01.1.1.016.2007. eCollection 2007
• Hjornevik T, Leergaard TB, Darine D, Moldestad O, Dale AM, Willoch F, Bjaalie JG.
  Three-dimensional atlas system for mouse and rat brain imaging data.
  Front Neuroinform. 2007 Nov 2;1:4. doi: 10.3389/neuro.11.004.2007. eCollection 2007.
• Moene IA, Subramaniam S, Darin D, Leergaard TB, Bjaalie JG.
  Toward a workbench for rodent brain image data: systems architecture and design.
  Neuroinformatics. 2007 Spring;5(1):35-58.
• Leergaard TB, Lillehaug S, De Schutter E, Bower JM, Bjaalie JG. Topographical organization of pathways from somatosensory cortex through the pontine nuclei to tactile regions of the rat cerebellar hemispheres.
  Eur J Neurosci. 2006 Nov;24(10):2801-12.
• Boy J, Leergaard TB, Schmidt T, Odeh F, Bichelmeier U, Nuber S, Holzmann C, Wree A, Prusiner SB, Bujard H, Riess O, Bjaalie JG.
  Expression mapping of tetracycline-responsive prion protein promoter: digital atlasing for generating cell-specific disease models.
  Neuroimage. 2006 Nov 1;33(2):449-62. Epub 2006 Aug 23.
• Bjaalie JG, Leergaard TB, Pettersen C.
  Micro3D: computer program for three-dimensional reconstruction visualization, and analysis of neuronal populations and brain regions.
  Int J Neurosci. 2006 Apr;116(4):515-40.
• Odeh F, Ackerley R, Bjaalie JG, Apps R.
  Pontine maps linking somatosensory and cerebellarcortices are in register with climbing fiber somatotopy.
  J Neurosci 25:5680-5690, 2005.
• Bjaalie JG, Leergaard TB, Lillehaug S, Odeh F, Moene IA, Kjode JO, Darine D.
  Database and tools for analysis of topographic organization and map transformations in major projection systems of the brain.
  Neuroscience. 2005;136(3):681-95.
  
• Leergaard TB, Alloway KD, Pham TA, Bolstad I, Hoffer ZS, Pettersen C, Bjaalie JG.
  Three-dimensional topography of corticopontine projections from rat sensorimotor cortex: comparisons with corticostriatal projections reveal diverse integrative organization.
  J Comp Neurol. 2004 Oct 18;478(3):306-22.
• Leergaard TB, Alloway KD, Mutic JJ, Bjaalie JG.
  Three-dimensional topography of corticopontine projections from rat barrel cortex: correlations with corticostriatal organization.
  J Neurosci. 2000 Nov 15;20(22):8474-84.
• Leergaard TB, Lyngstad KA, Thompson JH, Taeymans S, Vos BP, De Schutter E, Bower JM, Bjaalie JG.
  Rat somatosensory cerebropontocerebellar pathways: spatial relationships of the somatotopic map of the primary somatosensory cortex are preserved in a three-dimensional clustered pontine map.
  J Comp Neurol. 2000 Jun 26;422(2):246-66.